Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5838 |
| Number of amino acids: | 262 |
| Molecular Weight: | 30403.33 Da |
| Theoretical pI: | 8.76 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 9 | 3.44% |
| Cysteine CYS (C) | 4 | 1.53% |
| Glutamic Acid GLU (E) | 5 | 1.91% |
| Aspartic Acid ASP (D) | 1 | 0.38% |
| Glycine GLY (G) | 5 | 1.91% |
| Phynylalanine PHE (F) | 9 | 3.44% |
| Isoleucine ILE (I) | 13 | 4.96% |
| Histidine HIS (H) | 6 | 2.29% |
| Lysine LYS (K) | 4 | 1.53% |
| Methionine MET (M) | 2 | 0.76% |
| Leucine LEU (L) | 24 | 9.16% |
| Asparagine ASN (N) | 5 | 1.91% |
| Glutamine GLN (Q) | 92 | 35.11% |
| Proline PRO (P) | 36 | 13.74% |
| Serine SER (S) | 14 | 5.34% |
| Arginine ARG (R) | 5 | 1.91% |
| Threonine THR (T) | 6 | 2.29% |
| Tryptophan TRP (W) | 1 | 0.38% |
| Valine VAL (V) | 14 | 5.34% |
| Tyrosine TYR (Y) | 7 | 2.67% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1351 |
| Hydrogen | H | 2107 |
| Nitrogen | N | 391 |
| Oxygen | O | 399 |
| Sulphur | S | 6 |
| Formula | C1351H2107N391O399S6 |
| Total Number of Atoms: | 4254 |
| Total number of positively charged residues (ARG + LYS): | 9 |
| Total number of negatively charged residues (ASP + GLU): | 6 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 16180 Absorption 0.1% (=1 g/l) 0.532, assuming all pairs of CYS residues form cystines Ext. coefficient 15930 Absorption 0.1% (=1 g/l) 0.524, assuming all CYS residues are reduced |
| Aromaticity: | 0.065 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 116.27 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.95, 22.90, 15.27] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.0076 |
| Grand average of hydropathicity (GRAVY): | -0.91 |