Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5837 |
| Number of amino acids: | 509 |
| Molecular Weight: | 56502.59 Da |
| Theoretical pI: | 7.76 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 29 | 5.7% |
| Cysteine CYS (C) | 7 | 1.38% |
| Glutamic Acid GLU (E) | 21 | 4.13% |
| Aspartic Acid ASP (D) | 18 | 3.54% |
| Glycine GLY (G) | 48 | 9.43% |
| Phynylalanine PHE (F) | 13 | 2.55% |
| Isoleucine ILE (I) | 29 | 5.7% |
| Histidine HIS (H) | 9 | 1.77% |
| Lysine LYS (K) | 11 | 2.16% |
| Methionine MET (M) | 10 | 1.96% |
| Leucine LEU (L) | 42 | 8.25% |
| Asparagine ASN (N) | 32 | 6.29% |
| Glutamine GLN (Q) | 79 | 15.52% |
| Proline PRO (P) | 29 | 5.7% |
| Serine SER (S) | 25 | 4.91% |
| Arginine ARG (R) | 29 | 5.7% |
| Threonine THR (T) | 22 | 4.32% |
| Tryptophan TRP (W) | 5 | 0.98% |
| Valine VAL (V) | 39 | 7.66% |
| Tyrosine TYR (Y) | 12 | 2.36% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2457 |
| Hydrogen | H | 3909 |
| Nitrogen | N | 741 |
| Oxygen | O | 758 |
| Sulphur | S | 17 |
| Formula | C2457H3909N741O758S17 |
| Total Number of Atoms: | 7882 |
| Total number of positively charged residues (ARG + LYS): | 40 |
| Total number of negatively charged residues (ASP + GLU): | 39 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 45755 Absorption 0.1% (=1 g/l) 0.810, assuming all pairs of CYS residues form cystines Ext. coefficient 45380 Absorption 0.1% (=1 g/l) 0.803, assuming all CYS residues are reduced |
| Aromaticity: | 0.059 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 48.19 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.50, 26.33, 20.04] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.3183 |
| Grand average of hydropathicity (GRAVY): | -0.53 |