Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5836 |
| Number of amino acids: | 266 |
| Molecular Weight: | 28975.74 Da |
| Theoretical pI: | 8.37 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 21 | 7.89% |
| Cysteine CYS (C) | 9 | 3.38% |
| Glutamic Acid GLU (E) | 10 | 3.76% |
| Aspartic Acid ASP (D) | 11 | 4.14% |
| Glycine GLY (G) | 27 | 10.15% |
| Phynylalanine PHE (F) | 13 | 4.89% |
| Isoleucine ILE (I) | 15 | 5.64% |
| Histidine HIS (H) | 4 | 1.5% |
| Lysine LYS (K) | 9 | 3.38% |
| Methionine MET (M) | 5 | 1.88% |
| Leucine LEU (L) | 17 | 6.39% |
| Asparagine ASN (N) | 15 | 5.64% |
| Glutamine GLN (Q) | 7 | 2.63% |
| Proline PRO (P) | 16 | 6.02% |
| Serine SER (S) | 26 | 9.77% |
| Arginine ARG (R) | 15 | 5.64% |
| Threonine THR (T) | 16 | 6.02% |
| Tryptophan TRP (W) | 7 | 2.63% |
| Valine VAL (V) | 14 | 5.26% |
| Tyrosine TYR (Y) | 9 | 3.38% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1285 |
| Hydrogen | H | 1965 |
| Nitrogen | N | 357 |
| Oxygen | O | 382 |
| Sulphur | S | 14 |
| Formula | C1285H1965N357O382S14 |
| Total Number of Atoms: | 4003 |
| Total number of positively charged residues (ARG + LYS): | 24 |
| Total number of negatively charged residues (ASP + GLU): | 21 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 52410 Absorption 0.1% (=1 g/l) 1.809, assuming all pairs of CYS residues form cystines Ext. coefficient 51910 Absorption 0.1% (=1 g/l) 1.792, assuming all CYS residues are reduced |
| Aromaticity: | 0.109 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 43.21 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.20, 31.58, 19.92] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 70.0752 |
| Grand average of hydropathicity (GRAVY): | -0.21 |