Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5835 |
| Number of amino acids: | 203 |
| Molecular Weight: | 22545.94 Da |
| Theoretical pI: | 4.97 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 14 | 6.9% |
| Cysteine CYS (C) | 5 | 2.46% |
| Glutamic Acid GLU (E) | 11 | 5.42% |
| Aspartic Acid ASP (D) | 14 | 6.9% |
| Glycine GLY (G) | 15 | 7.39% |
| Phynylalanine PHE (F) | 13 | 6.4% |
| Isoleucine ILE (I) | 14 | 6.9% |
| Histidine HIS (H) | 1 | 0.49% |
| Lysine LYS (K) | 11 | 5.42% |
| Methionine MET (M) | 4 | 1.97% |
| Leucine LEU (L) | 19 | 9.36% |
| Asparagine ASN (N) | 6 | 2.96% |
| Glutamine GLN (Q) | 9 | 4.43% |
| Proline PRO (P) | 10 | 4.93% |
| Serine SER (S) | 12 | 5.91% |
| Arginine ARG (R) | 9 | 4.43% |
| Threonine THR (T) | 12 | 5.91% |
| Tryptophan TRP (W) | 2 | 0.99% |
| Valine VAL (V) | 16 | 7.88% |
| Tyrosine TYR (Y) | 6 | 2.96% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1018 |
| Hydrogen | H | 1592 |
| Nitrogen | N | 260 |
| Oxygen | O | 299 |
| Sulphur | S | 9 |
| Formula | C1018H1592N260O299S9 |
| Total Number of Atoms: | 3178 |
| Total number of positively charged residues (ARG + LYS): | 20 |
| Total number of negatively charged residues (ASP + GLU): | 25 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 20190 Absorption 0.1% (=1 g/l) 0.896, assuming all pairs of CYS residues form cystines Ext. coefficient 19940 Absorption 0.1% (=1 g/l) 0.884, assuming all CYS residues are reduced |
| Aromaticity: | 0.103 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.27 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.48, 21.18, 23.65] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 93.1527 |
| Grand average of hydropathicity (GRAVY): | 0.04 |