Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5830 |
| Number of amino acids: | 296 |
| Molecular Weight: | 33941.3 Da |
| Theoretical pI: | 8.83 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 13 | 4.39% |
| Cysteine CYS (C) | 6 | 2.03% |
| Glutamic Acid GLU (E) | 3 | 1.01% |
| Aspartic Acid ASP (D) | 1 | 0.34% |
| Glycine GLY (G) | 7 | 2.36% |
| Phynylalanine PHE (F) | 12 | 4.05% |
| Isoleucine ILE (I) | 15 | 5.07% |
| Histidine HIS (H) | 5 | 1.69% |
| Lysine LYS (K) | 1 | 0.34% |
| Methionine MET (M) | 2 | 0.68% |
| Leucine LEU (L) | 22 | 7.43% |
| Asparagine ASN (N) | 7 | 2.36% |
| Glutamine GLN (Q) | 97 | 32.77% |
| Proline PRO (P) | 50 | 16.89% |
| Serine SER (S) | 14 | 4.73% |
| Arginine ARG (R) | 7 | 2.36% |
| Threonine THR (T) | 10 | 3.38% |
| Tryptophan TRP (W) | 1 | 0.34% |
| Valine VAL (V) | 14 | 4.73% |
| Tyrosine TYR (Y) | 9 | 3.04% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1515 |
| Hydrogen | H | 2333 |
| Nitrogen | N | 433 |
| Oxygen | O | 442 |
| Sulphur | S | 8 |
| Formula | C1515H2333N433O442S8 |
| Total Number of Atoms: | 4731 |
| Total number of positively charged residues (ARG + LYS): | 8 |
| Total number of negatively charged residues (ASP + GLU): | 4 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 19285 Absorption 0.1% (=1 g/l) 0.568, assuming all pairs of CYS residues form cystines Ext. coefficient 18910 Absorption 0.1% (=1 g/l) 0.557, assuming all CYS residues are reduced |
| Aromaticity: | 0.074 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 115.16 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.66, 26.35, 13.51] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 66.8581 |
| Grand average of hydropathicity (GRAVY): | -0.87 |