Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5820 |
| Number of amino acids: | 223 |
| Molecular Weight: | 26075.35 Da |
| Theoretical pI: | 8.69 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 6 | 2.69% |
| Cysteine CYS (C) | 9 | 4.04% |
| Glutamic Acid GLU (E) | 9 | 4.04% |
| Aspartic Acid ASP (D) | 13 | 5.83% |
| Glycine GLY (G) | 11 | 4.93% |
| Phynylalanine PHE (F) | 17 | 7.62% |
| Isoleucine ILE (I) | 14 | 6.28% |
| Histidine HIS (H) | 7 | 3.14% |
| Lysine LYS (K) | 16 | 7.17% |
| Methionine MET (M) | 4 | 1.79% |
| Leucine LEU (L) | 26 | 11.66% |
| Asparagine ASN (N) | 6 | 2.69% |
| Glutamine GLN (Q) | 13 | 5.83% |
| Proline PRO (P) | 16 | 7.17% |
| Serine SER (S) | 10 | 4.48% |
| Arginine ARG (R) | 11 | 4.93% |
| Threonine THR (T) | 15 | 6.73% |
| Tryptophan TRP (W) | 4 | 1.79% |
| Valine VAL (V) | 8 | 3.59% |
| Tyrosine TYR (Y) | 8 | 3.59% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1196 |
| Hydrogen | H | 1831 |
| Nitrogen | N | 309 |
| Oxygen | O | 320 |
| Sulphur | S | 13 |
| Formula | C1196H1831N309O320S13 |
| Total Number of Atoms: | 3669 |
| Total number of positively charged residues (ARG + LYS): | 27 |
| Total number of negatively charged residues (ASP + GLU): | 22 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 34420 Absorption 0.1% (=1 g/l) 1.320, assuming all pairs of CYS residues form cystines Ext. coefficient 33920 Absorption 0.1% (=1 g/l) 1.301, assuming all CYS residues are reduced |
| Aromaticity: | 0.130 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 28.79 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.53, 19.28, 20.18] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.0494 |
| Grand average of hydropathicity (GRAVY): | -0.25 |