Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5819 |
| Number of amino acids: | 206 |
| Molecular Weight: | 23930.32 Da |
| Theoretical pI: | 5.28 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 13 | 6.31% |
| Cysteine CYS (C) | 3 | 1.46% |
| Glutamic Acid GLU (E) | 15 | 7.28% |
| Aspartic Acid ASP (D) | 10 | 4.85% |
| Glycine GLY (G) | 15 | 7.28% |
| Phynylalanine PHE (F) | 12 | 5.83% |
| Isoleucine ILE (I) | 14 | 6.8% |
| Histidine HIS (H) | 3 | 1.46% |
| Lysine LYS (K) | 13 | 6.31% |
| Methionine MET (M) | 5 | 2.43% |
| Leucine LEU (L) | 16 | 7.77% |
| Asparagine ASN (N) | 10 | 4.85% |
| Glutamine GLN (Q) | 8 | 3.88% |
| Proline PRO (P) | 8 | 3.88% |
| Serine SER (S) | 10 | 4.85% |
| Arginine ARG (R) | 7 | 3.4% |
| Threonine THR (T) | 10 | 4.85% |
| Tryptophan TRP (W) | 9 | 4.37% |
| Valine VAL (V) | 13 | 6.31% |
| Tyrosine TYR (Y) | 12 | 5.83% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1106 |
| Hydrogen | H | 1641 |
| Nitrogen | N | 273 |
| Oxygen | O | 307 |
| Sulphur | S | 8 |
| Formula | C1106H1641N273O307S8 |
| Total Number of Atoms: | 3335 |
| Total number of positively charged residues (ARG + LYS): | 20 |
| Total number of negatively charged residues (ASP + GLU): | 25 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 67505 Absorption 0.1% (=1 g/l) 2.821, assuming all pairs of CYS residues form cystines Ext. coefficient 67380 Absorption 0.1% (=1 g/l) 2.816, assuming all CYS residues are reduced |
| Aromaticity: | 0.160 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 34.80 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [36.89, 20.87, 23.79] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 81.4078 |
| Grand average of hydropathicity (GRAVY): | -0.23 |