Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5816 |
| Number of amino acids: | 252 |
| Molecular Weight: | 25591.67 Da |
| Theoretical pI: | 7.91 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 29 | 11.51% |
| Cysteine CYS (C) | 3 | 1.19% |
| Glutamic Acid GLU (E) | 4 | 1.59% |
| Aspartic Acid ASP (D) | 6 | 2.38% |
| Glycine GLY (G) | 30 | 11.9% |
| Phynylalanine PHE (F) | 12 | 4.76% |
| Isoleucine ILE (I) | 11 | 4.37% |
| Histidine HIS (H) | 3 | 1.19% |
| Lysine LYS (K) | 5 | 1.98% |
| Methionine MET (M) | 2 | 0.79% |
| Leucine LEU (L) | 21 | 8.33% |
| Asparagine ASN (N) | 17 | 6.75% |
| Glutamine GLN (Q) | 7 | 2.78% |
| Proline PRO (P) | 17 | 6.75% |
| Serine SER (S) | 36 | 14.29% |
| Arginine ARG (R) | 6 | 2.38% |
| Threonine THR (T) | 14 | 5.56% |
| Tryptophan TRP (W) | 4 | 1.59% |
| Valine VAL (V) | 19 | 7.54% |
| Tyrosine TYR (Y) | 6 | 2.38% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1139 |
| Hydrogen | H | 1761 |
| Nitrogen | N | 309 |
| Oxygen | O | 353 |
| Sulphur | S | 5 |
| Formula | C1139H1761N309O353S5 |
| Total Number of Atoms: | 3567 |
| Total number of positively charged residues (ARG + LYS): | 11 |
| Total number of negatively charged residues (ASP + GLU): | 10 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 31065 Absorption 0.1% (=1 g/l) 1.214, assuming all pairs of CYS residues form cystines Ext. coefficient 30940 Absorption 0.1% (=1 g/l) 1.209, assuming all CYS residues are reduced |
| Aromaticity: | 0.087 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 50.36 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.97, 39.68, 22.22] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.8968 |
| Grand average of hydropathicity (GRAVY): | 0.17 |