Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5809 |
| Number of amino acids: | 286 |
| Molecular Weight: | 32063.93 Da |
| Theoretical pI: | 5.05 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 16 | 5.59% |
| Cysteine CYS (C) | 5 | 1.75% |
| Glutamic Acid GLU (E) | 14 | 4.9% |
| Aspartic Acid ASP (D) | 15 | 5.24% |
| Glycine GLY (G) | 25 | 8.74% |
| Phynylalanine PHE (F) | 16 | 5.59% |
| Isoleucine ILE (I) | 14 | 4.9% |
| Histidine HIS (H) | 2 | 0.7% |
| Lysine LYS (K) | 12 | 4.2% |
| Methionine MET (M) | 9 | 3.15% |
| Leucine LEU (L) | 21 | 7.34% |
| Asparagine ASN (N) | 17 | 5.94% |
| Glutamine GLN (Q) | 17 | 5.94% |
| Proline PRO (P) | 11 | 3.85% |
| Serine SER (S) | 28 | 9.79% |
| Arginine ARG (R) | 11 | 3.85% |
| Threonine THR (T) | 20 | 6.99% |
| Tryptophan TRP (W) | 9 | 3.15% |
| Valine VAL (V) | 13 | 4.55% |
| Tyrosine TYR (Y) | 11 | 3.85% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1427 |
| Hydrogen | H | 2156 |
| Nitrogen | N | 378 |
| Oxygen | O | 438 |
| Sulphur | S | 14 |
| Formula | C1427H2156N378O438S14 |
| Total Number of Atoms: | 4413 |
| Total number of positively charged residues (ARG + LYS): | 23 |
| Total number of negatively charged residues (ASP + GLU): | 29 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 66140 Absorption 0.1% (=1 g/l) 2.063, assuming all pairs of CYS residues form cystines Ext. coefficient 65890 Absorption 0.1% (=1 g/l) 2.055, assuming all CYS residues are reduced |
| Aromaticity: | 0.126 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 31.50 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.37, 28.32, 20.98] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 66.5035 |
| Grand average of hydropathicity (GRAVY): | -0.38 |