Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5786 |
| Number of amino acids: | 306 |
| Molecular Weight: | 34225.49 Da |
| Theoretical pI: | 9.81 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 7 | 2.29% |
| Cysteine CYS (C) | 0 | 0% |
| Glutamic Acid GLU (E) | 8 | 2.61% |
| Aspartic Acid ASP (D) | 0 | 0% |
| Glycine GLY (G) | 2 | 0.65% |
| Phynylalanine PHE (F) | 2 | 0.65% |
| Isoleucine ILE (I) | 2 | 0.65% |
| Histidine HIS (H) | 26 | 8.5% |
| Lysine LYS (K) | 33 | 10.78% |
| Methionine MET (M) | 5 | 1.63% |
| Leucine LEU (L) | 6 | 1.96% |
| Asparagine ASN (N) | 1 | 0.33% |
| Glutamine GLN (Q) | 0 | 0% |
| Proline PRO (P) | 116 | 37.91% |
| Serine SER (S) | 36 | 11.76% |
| Arginine ARG (R) | 2 | 0.65% |
| Threonine THR (T) | 12 | 3.92% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 15 | 4.9% |
| Tyrosine TYR (Y) | 33 | 10.78% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1634 |
| Hydrogen | H | 2366 |
| Nitrogen | N | 398 |
| Oxygen | O | 405 |
| Sulphur | S | 5 |
| Formula | C1634H2366N398O405S5 |
| Total Number of Atoms: | 4808 |
| Total number of positively charged residues (ARG + LYS): | 35 |
| Total number of negatively charged residues (ASP + GLU): | 8 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 49170 Absorption 0.1% (=1 g/l) 1.437 |
| Aromaticity: | 0.114 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 129.11 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [18.95, 50.65, 8.50] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 26.6993 |
| Grand average of hydropathicity (GRAVY): | -1.29 |