Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5759 |
| Number of amino acids: | 324 |
| Molecular Weight: | 36728.01 Da |
| Theoretical pI: | 5.56 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 22 | 6.79% |
| Cysteine CYS (C) | 9 | 2.78% |
| Glutamic Acid GLU (E) | 18 | 5.56% |
| Aspartic Acid ASP (D) | 18 | 5.56% |
| Glycine GLY (G) | 22 | 6.79% |
| Phynylalanine PHE (F) | 14 | 4.32% |
| Isoleucine ILE (I) | 21 | 6.48% |
| Histidine HIS (H) | 3 | 0.93% |
| Lysine LYS (K) | 16 | 4.94% |
| Methionine MET (M) | 5 | 1.54% |
| Leucine LEU (L) | 37 | 11.42% |
| Asparagine ASN (N) | 14 | 4.32% |
| Glutamine GLN (Q) | 13 | 4.01% |
| Proline PRO (P) | 17 | 5.25% |
| Serine SER (S) | 23 | 7.1% |
| Arginine ARG (R) | 16 | 4.94% |
| Threonine THR (T) | 16 | 4.94% |
| Tryptophan TRP (W) | 7 | 2.16% |
| Valine VAL (V) | 14 | 4.32% |
| Tyrosine TYR (Y) | 19 | 5.86% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1665 |
| Hydrogen | H | 2554 |
| Nitrogen | N | 428 |
| Oxygen | O | 482 |
| Sulphur | S | 14 |
| Formula | C1665H2554N428O482S14 |
| Total Number of Atoms: | 5143 |
| Total number of positively charged residues (ARG + LYS): | 32 |
| Total number of negatively charged residues (ASP + GLU): | 36 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 67310 Absorption 0.1% (=1 g/l) 1.833, assuming all pairs of CYS residues form cystines Ext. coefficient 66810 Absorption 0.1% (=1 g/l) 1.819, assuming all CYS residues are reduced |
| Aromaticity: | 0.123 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.28 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.57, 23.46, 25.31] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 89.136 |
| Grand average of hydropathicity (GRAVY): | -0.17 |