Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5756 |
| Number of amino acids: | 281 |
| Molecular Weight: | 30751.7 Da |
| Theoretical pI: | 4.91 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 21 | 7.47% |
| Cysteine CYS (C) | 1 | 0.36% |
| Glutamic Acid GLU (E) | 10 | 3.56% |
| Aspartic Acid ASP (D) | 15 | 5.34% |
| Glycine GLY (G) | 18 | 6.41% |
| Phynylalanine PHE (F) | 15 | 5.34% |
| Isoleucine ILE (I) | 18 | 6.41% |
| Histidine HIS (H) | 5 | 1.78% |
| Lysine LYS (K) | 11 | 3.91% |
| Methionine MET (M) | 4 | 1.42% |
| Leucine LEU (L) | 24 | 8.54% |
| Asparagine ASN (N) | 16 | 5.69% |
| Glutamine GLN (Q) | 15 | 5.34% |
| Proline PRO (P) | 17 | 6.05% |
| Serine SER (S) | 26 | 9.25% |
| Arginine ARG (R) | 5 | 1.78% |
| Threonine THR (T) | 23 | 8.19% |
| Tryptophan TRP (W) | 5 | 1.78% |
| Valine VAL (V) | 22 | 7.83% |
| Tyrosine TYR (Y) | 10 | 3.56% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1394 |
| Hydrogen | H | 2135 |
| Nitrogen | N | 353 |
| Oxygen | O | 422 |
| Sulphur | S | 5 |
| Formula | C1394H2135N353O422S5 |
| Total Number of Atoms: | 4309 |
| Total number of positively charged residues (ARG + LYS): | 16 |
| Total number of negatively charged residues (ASP + GLU): | 25 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 42400 Absorption 0.1% (=1 g/l) 1.379, assuming all pairs of CYS residues form cystines Ext. coefficient 42400 Absorption 0.1% (=1 g/l) 1.379, assuming all CYS residues are reduced |
| Aromaticity: | 0.107 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 32.19 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.45, 27.40, 21.00] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 88.4698 |
| Grand average of hydropathicity (GRAVY): | -0.04 |