Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5731 |
| Number of amino acids: | 273 |
| Molecular Weight: | 28175.71 Da |
| Theoretical pI: | 5.91 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 29 | 10.62% |
| Cysteine CYS (C) | 10 | 3.66% |
| Glutamic Acid GLU (E) | 6 | 2.2% |
| Aspartic Acid ASP (D) | 15 | 5.49% |
| Glycine GLY (G) | 40 | 14.65% |
| Phynylalanine PHE (F) | 6 | 2.2% |
| Isoleucine ILE (I) | 8 | 2.93% |
| Histidine HIS (H) | 3 | 1.1% |
| Lysine LYS (K) | 9 | 3.3% |
| Methionine MET (M) | 6 | 2.2% |
| Leucine LEU (L) | 19 | 6.96% |
| Asparagine ASN (N) | 8 | 2.93% |
| Glutamine GLN (Q) | 13 | 4.76% |
| Proline PRO (P) | 17 | 6.23% |
| Serine SER (S) | 28 | 10.26% |
| Arginine ARG (R) | 10 | 3.66% |
| Threonine THR (T) | 8 | 2.93% |
| Tryptophan TRP (W) | 7 | 2.56% |
| Valine VAL (V) | 22 | 8.06% |
| Tyrosine TYR (Y) | 9 | 3.3% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1231 |
| Hydrogen | H | 1904 |
| Nitrogen | N | 346 |
| Oxygen | O | 382 |
| Sulphur | S | 16 |
| Formula | C1231H1904N346O382S16 |
| Total Number of Atoms: | 3879 |
| Total number of positively charged residues (ARG + LYS): | 19 |
| Total number of negatively charged residues (ASP + GLU): | 21 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 52535 Absorption 0.1% (=1 g/l) 1.865, assuming all pairs of CYS residues form cystines Ext. coefficient 51910 Absorption 0.1% (=1 g/l) 1.842, assuming all CYS residues are reduced |
| Aromaticity: | 0.081 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.91 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.01, 34.07, 21.98] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 72.5641 |
| Grand average of hydropathicity (GRAVY): | -0.07 |