Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5727 |
| Number of amino acids: | 187 |
| Molecular Weight: | 20814.48 Da |
| Theoretical pI: | 9.19 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 13 | 6.95% |
| Cysteine CYS (C) | 5 | 2.67% |
| Glutamic Acid GLU (E) | 9 | 4.81% |
| Aspartic Acid ASP (D) | 7 | 3.74% |
| Glycine GLY (G) | 13 | 6.95% |
| Phynylalanine PHE (F) | 6 | 3.21% |
| Isoleucine ILE (I) | 20 | 10.7% |
| Histidine HIS (H) | 2 | 1.07% |
| Lysine LYS (K) | 16 | 8.56% |
| Methionine MET (M) | 3 | 1.6% |
| Leucine LEU (L) | 21 | 11.23% |
| Asparagine ASN (N) | 8 | 4.28% |
| Glutamine GLN (Q) | 4 | 2.14% |
| Proline PRO (P) | 11 | 5.88% |
| Serine SER (S) | 9 | 4.81% |
| Arginine ARG (R) | 7 | 3.74% |
| Threonine THR (T) | 16 | 8.56% |
| Tryptophan TRP (W) | 4 | 2.14% |
| Valine VAL (V) | 7 | 3.74% |
| Tyrosine TYR (Y) | 6 | 3.21% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 949 |
| Hydrogen | H | 1522 |
| Nitrogen | N | 244 |
| Oxygen | O | 263 |
| Sulphur | S | 8 |
| Formula | C949H1522N244O263S8 |
| Total Number of Atoms: | 2986 |
| Total number of positively charged residues (ARG + LYS): | 23 |
| Total number of negatively charged residues (ASP + GLU): | 16 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 31190 Absorption 0.1% (=1 g/l) 1.498, assuming all pairs of CYS residues form cystines Ext. coefficient 30940 Absorption 0.1% (=1 g/l) 1.486, assuming all CYS residues are reduced |
| Aromaticity: | 0.086 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 34.38 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.22, 21.93, 24.60] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 103.315 |
| Grand average of hydropathicity (GRAVY): | 0.04 |