Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5719 |
| Number of amino acids: | 302 |
| Molecular Weight: | 34300.08 Da |
| Theoretical pI: | 7.73 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 13 | 4.3% |
| Cysteine CYS (C) | 9 | 2.98% |
| Glutamic Acid GLU (E) | 2 | 0.66% |
| Aspartic Acid ASP (D) | 4 | 1.32% |
| Glycine GLY (G) | 8 | 2.65% |
| Phynylalanine PHE (F) | 16 | 5.3% |
| Isoleucine ILE (I) | 18 | 5.96% |
| Histidine HIS (H) | 7 | 2.32% |
| Lysine LYS (K) | 3 | 0.99% |
| Methionine MET (M) | 7 | 2.32% |
| Leucine LEU (L) | 21 | 6.95% |
| Asparagine ASN (N) | 7 | 2.32% |
| Glutamine GLN (Q) | 90 | 29.8% |
| Proline PRO (P) | 50 | 16.56% |
| Serine SER (S) | 13 | 4.3% |
| Arginine ARG (R) | 4 | 1.32% |
| Threonine THR (T) | 14 | 4.64% |
| Tryptophan TRP (W) | 1 | 0.33% |
| Valine VAL (V) | 12 | 3.97% |
| Tyrosine TYR (Y) | 3 | 0.99% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1526 |
| Hydrogen | H | 2359 |
| Nitrogen | N | 429 |
| Oxygen | O | 442 |
| Sulphur | S | 16 |
| Formula | C1526H2359N429O442S16 |
| Total Number of Atoms: | 4772 |
| Total number of positively charged residues (ARG + LYS): | 7 |
| Total number of negatively charged residues (ASP + GLU): | 6 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 10470 Absorption 0.1% (=1 g/l) 0.305, assuming all pairs of CYS residues form cystines Ext. coefficient 9970 Absorption 0.1% (=1 g/l) 0.291, assuming all CYS residues are reduced |
| Aromaticity: | 0.066 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 99.09 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [23.51, 25.83, 14.24] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 66.192 |
| Grand average of hydropathicity (GRAVY): | -0.68 |