Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5671 |
| Number of amino acids: | 206 |
| Molecular Weight: | 23336.36 Da |
| Theoretical pI: | 9.87 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 4 | 1.94% |
| Cysteine CYS (C) | 0 | 0% |
| Glutamic Acid GLU (E) | 8 | 3.88% |
| Aspartic Acid ASP (D) | 0 | 0% |
| Glycine GLY (G) | 2 | 0.97% |
| Phynylalanine PHE (F) | 3 | 1.46% |
| Isoleucine ILE (I) | 1 | 0.49% |
| Histidine HIS (H) | 2 | 0.97% |
| Lysine LYS (K) | 34 | 16.5% |
| Methionine MET (M) | 1 | 0.49% |
| Leucine LEU (L) | 6 | 2.91% |
| Asparagine ASN (N) | 2 | 0.97% |
| Glutamine GLN (Q) | 2 | 0.97% |
| Proline PRO (P) | 74 | 35.92% |
| Serine SER (S) | 2 | 0.97% |
| Arginine ARG (R) | 0 | 0% |
| Threonine THR (T) | 0 | 0% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 40 | 19.42% |
| Tyrosine TYR (Y) | 25 | 12.14% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1165 |
| Hydrogen | H | 1760 |
| Nitrogen | N | 248 |
| Oxygen | O | 254 |
| Sulphur | S | 1 |
| Formula | C1165H1760N248O254S1 |
| Total Number of Atoms: | 3428 |
| Total number of positively charged residues (ARG + LYS): | 34 |
| Total number of negatively charged residues (ASP + GLU): | 8 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 37250 Absorption 0.1% (=1 g/l) 1.596 |
| Aromaticity: | 0.136 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 58.71 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [36.41, 38.84, 9.22] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 71.5049 |
| Grand average of hydropathicity (GRAVY): | -0.59 |