Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5669 |
| Number of amino acids: | 335 |
| Molecular Weight: | 34893.92 Da |
| Theoretical pI: | 4.56 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 42 | 12.54% |
| Cysteine CYS (C) | 2 | 0.6% |
| Glutamic Acid GLU (E) | 8 | 2.39% |
| Aspartic Acid ASP (D) | 15 | 4.48% |
| Glycine GLY (G) | 33 | 9.85% |
| Phynylalanine PHE (F) | 13 | 3.88% |
| Isoleucine ILE (I) | 15 | 4.48% |
| Histidine HIS (H) | 3 | 0.9% |
| Lysine LYS (K) | 5 | 1.49% |
| Methionine MET (M) | 6 | 1.79% |
| Leucine LEU (L) | 27 | 8.06% |
| Asparagine ASN (N) | 25 | 7.46% |
| Glutamine GLN (Q) | 20 | 5.97% |
| Proline PRO (P) | 23 | 6.87% |
| Serine SER (S) | 32 | 9.55% |
| Arginine ARG (R) | 8 | 2.39% |
| Threonine THR (T) | 16 | 4.78% |
| Tryptophan TRP (W) | 2 | 0.6% |
| Valine VAL (V) | 26 | 7.76% |
| Tyrosine TYR (Y) | 14 | 4.18% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1546 |
| Hydrogen | H | 2385 |
| Nitrogen | N | 417 |
| Oxygen | O | 489 |
| Sulphur | S | 8 |
| Formula | C1546H2385N417O489S8 |
| Total Number of Atoms: | 4845 |
| Total number of positively charged residues (ARG + LYS): | 13 |
| Total number of negatively charged residues (ASP + GLU): | 23 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 31985 Absorption 0.1% (=1 g/l) 0.917, assuming all pairs of CYS residues form cystines Ext. coefficient 31860 Absorption 0.1% (=1 g/l) 0.913, assuming all CYS residues are reduced |
| Aromaticity: | 0.087 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 43.86 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.96, 33.73, 24.78] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.9403 |
| Grand average of hydropathicity (GRAVY): | -0.01 |