Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5668 |
| Number of amino acids: | 328 |
| Molecular Weight: | 35406.73 Da |
| Theoretical pI: | 8.64 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 25 | 7.62% |
| Cysteine CYS (C) | 17 | 5.18% |
| Glutamic Acid GLU (E) | 6 | 1.83% |
| Aspartic Acid ASP (D) | 16 | 4.88% |
| Glycine GLY (G) | 44 | 13.41% |
| Phynylalanine PHE (F) | 17 | 5.18% |
| Isoleucine ILE (I) | 15 | 4.57% |
| Histidine HIS (H) | 5 | 1.52% |
| Lysine LYS (K) | 9 | 2.74% |
| Methionine MET (M) | 4 | 1.22% |
| Leucine LEU (L) | 20 | 6.1% |
| Asparagine ASN (N) | 25 | 7.62% |
| Glutamine GLN (Q) | 13 | 3.96% |
| Proline PRO (P) | 22 | 6.71% |
| Serine SER (S) | 25 | 7.62% |
| Arginine ARG (R) | 20 | 6.1% |
| Threonine THR (T) | 12 | 3.66% |
| Tryptophan TRP (W) | 8 | 2.44% |
| Valine VAL (V) | 13 | 3.96% |
| Tyrosine TYR (Y) | 12 | 3.66% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1554 |
| Hydrogen | H | 2345 |
| Nitrogen | N | 453 |
| Oxygen | O | 460 |
| Sulphur | S | 21 |
| Formula | C1554H2345N453O460S21 |
| Total Number of Atoms: | 4833 |
| Total number of positively charged residues (ARG + LYS): | 29 |
| Total number of negatively charged residues (ASP + GLU): | 22 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 62880 Absorption 0.1% (=1 g/l) 1.776, assuming all pairs of CYS residues form cystines Ext. coefficient 61880 Absorption 0.1% (=1 g/l) 1.748, assuming all CYS residues are reduced |
| Aromaticity: | 0.113 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.51 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.91, 35.37, 16.77] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 60.7317 |
| Grand average of hydropathicity (GRAVY): | -0.35 |