Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5661 |
| Number of amino acids: | 348 |
| Molecular Weight: | 38787.99 Da |
| Theoretical pI: | 8.6 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 18 | 5.17% |
| Cysteine CYS (C) | 8 | 2.3% |
| Glutamic Acid GLU (E) | 23 | 6.61% |
| Aspartic Acid ASP (D) | 14 | 4.02% |
| Glycine GLY (G) | 35 | 10.06% |
| Phynylalanine PHE (F) | 14 | 4.02% |
| Isoleucine ILE (I) | 20 | 5.75% |
| Histidine HIS (H) | 6 | 1.72% |
| Lysine LYS (K) | 29 | 8.33% |
| Methionine MET (M) | 4 | 1.15% |
| Leucine LEU (L) | 24 | 6.9% |
| Asparagine ASN (N) | 24 | 6.9% |
| Glutamine GLN (Q) | 10 | 2.87% |
| Proline PRO (P) | 14 | 4.02% |
| Serine SER (S) | 26 | 7.47% |
| Arginine ARG (R) | 13 | 3.74% |
| Threonine THR (T) | 14 | 4.02% |
| Tryptophan TRP (W) | 6 | 1.72% |
| Valine VAL (V) | 27 | 7.76% |
| Tyrosine TYR (Y) | 19 | 5.46% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1739 |
| Hydrogen | H | 2684 |
| Nitrogen | N | 468 |
| Oxygen | O | 516 |
| Sulphur | S | 12 |
| Formula | C1739H2684N468O516S12 |
| Total Number of Atoms: | 5419 |
| Total number of positively charged residues (ARG + LYS): | 42 |
| Total number of negatively charged residues (ASP + GLU): | 37 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 61810 Absorption 0.1% (=1 g/l) 1.594, assuming all pairs of CYS residues form cystines Ext. coefficient 61310 Absorption 0.1% (=1 g/l) 1.581, assuming all CYS residues are reduced |
| Aromaticity: | 0.112 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.64 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.61, 28.45, 19.83] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 76.9828 |
| Grand average of hydropathicity (GRAVY): | -0.41 |