Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5653 |
| Number of amino acids: | 330 |
| Molecular Weight: | 37294.86 Da |
| Theoretical pI: | 7.72 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 19 | 5.76% |
| Cysteine CYS (C) | 9 | 2.73% |
| Glutamic Acid GLU (E) | 23 | 6.97% |
| Aspartic Acid ASP (D) | 21 | 6.36% |
| Glycine GLY (G) | 20 | 6.06% |
| Phynylalanine PHE (F) | 9 | 2.73% |
| Isoleucine ILE (I) | 17 | 5.15% |
| Histidine HIS (H) | 13 | 3.94% |
| Lysine LYS (K) | 23 | 6.97% |
| Methionine MET (M) | 9 | 2.73% |
| Leucine LEU (L) | 36 | 10.91% |
| Asparagine ASN (N) | 16 | 4.85% |
| Glutamine GLN (Q) | 7 | 2.12% |
| Proline PRO (P) | 17 | 5.15% |
| Serine SER (S) | 21 | 6.36% |
| Arginine ARG (R) | 22 | 6.67% |
| Threonine THR (T) | 13 | 3.94% |
| Tryptophan TRP (W) | 2 | 0.61% |
| Valine VAL (V) | 23 | 6.97% |
| Tyrosine TYR (Y) | 10 | 3.03% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1641 |
| Hydrogen | H | 2628 |
| Nitrogen | N | 470 |
| Oxygen | O | 486 |
| Sulphur | S | 18 |
| Formula | C1641H2628N470O486S18 |
| Total Number of Atoms: | 5243 |
| Total number of positively charged residues (ARG + LYS): | 45 |
| Total number of negatively charged residues (ASP + GLU): | 44 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 26400 Absorption 0.1% (=1 g/l) 0.708, assuming all pairs of CYS residues form cystines Ext. coefficient 25900 Absorption 0.1% (=1 g/l) 0.694, assuming all CYS residues are reduced |
| Aromaticity: | 0.064 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.80 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.39, 22.42, 26.36] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 88.6061 |
| Grand average of hydropathicity (GRAVY): | -0.40 |