Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5648 |
| Number of amino acids: | 126 |
| Molecular Weight: | 12978.79 Da |
| Theoretical pI: | 8.79 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 12 | 9.52% |
| Cysteine CYS (C) | 4 | 3.17% |
| Glutamic Acid GLU (E) | 3 | 2.38% |
| Aspartic Acid ASP (D) | 4 | 3.17% |
| Glycine GLY (G) | 19 | 15.08% |
| Phynylalanine PHE (F) | 7 | 5.56% |
| Isoleucine ILE (I) | 3 | 2.38% |
| Histidine HIS (H) | 2 | 1.59% |
| Lysine LYS (K) | 5 | 3.97% |
| Methionine MET (M) | 1 | 0.79% |
| Leucine LEU (L) | 7 | 5.56% |
| Asparagine ASN (N) | 4 | 3.17% |
| Glutamine GLN (Q) | 2 | 1.59% |
| Proline PRO (P) | 5 | 3.97% |
| Serine SER (S) | 11 | 8.73% |
| Arginine ARG (R) | 5 | 3.97% |
| Threonine THR (T) | 8 | 6.35% |
| Tryptophan TRP (W) | 2 | 1.59% |
| Valine VAL (V) | 18 | 14.29% |
| Tyrosine TYR (Y) | 4 | 3.17% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 581 |
| Hydrogen | H | 900 |
| Nitrogen | N | 158 |
| Oxygen | O | 170 |
| Sulphur | S | 5 |
| Formula | C581H900N158O170S5 |
| Total Number of Atoms: | 1814 |
| Total number of positively charged residues (ARG + LYS): | 10 |
| Total number of negatively charged residues (ASP + GLU): | 7 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 17210 Absorption 0.1% (=1 g/l) 1.326, assuming all pairs of CYS residues form cystines Ext. coefficient 16960 Absorption 0.1% (=1 g/l) 1.307, assuming all CYS residues are reduced |
| Aromaticity: | 0.103 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 27.74 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.54, 30.95, 18.25] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 81.9047 |
| Grand average of hydropathicity (GRAVY): | 0.30 |