Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5640 |
| Number of amino acids: | 138 |
| Molecular Weight: | 14413.77 Da |
| Theoretical pI: | 8.16 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 12 | 8.7% |
| Cysteine CYS (C) | 8 | 5.8% |
| Glutamic Acid GLU (E) | 7 | 5.07% |
| Aspartic Acid ASP (D) | 6 | 4.35% |
| Glycine GLY (G) | 12 | 8.7% |
| Phynylalanine PHE (F) | 1 | 0.72% |
| Isoleucine ILE (I) | 5 | 3.62% |
| Histidine HIS (H) | 3 | 2.17% |
| Lysine LYS (K) | 11 | 7.97% |
| Methionine MET (M) | 4 | 2.9% |
| Leucine LEU (L) | 9 | 6.52% |
| Asparagine ASN (N) | 2 | 1.45% |
| Glutamine GLN (Q) | 3 | 2.17% |
| Proline PRO (P) | 10 | 7.25% |
| Serine SER (S) | 12 | 8.7% |
| Arginine ARG (R) | 4 | 2.9% |
| Threonine THR (T) | 9 | 6.52% |
| Tryptophan TRP (W) | 1 | 0.72% |
| Valine VAL (V) | 17 | 12.32% |
| Tyrosine TYR (Y) | 2 | 1.45% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 623 |
| Hydrogen | H | 1027 |
| Nitrogen | N | 173 |
| Oxygen | O | 193 |
| Sulphur | S | 12 |
| Formula | C623H1027N173O193S12 |
| Total Number of Atoms: | 2028 |
| Total number of positively charged residues (ARG + LYS): | 15 |
| Total number of negatively charged residues (ASP + GLU): | 13 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 8980 Absorption 0.1% (=1 g/l) 0.623, assuming all pairs of CYS residues form cystines Ext. coefficient 8480 Absorption 0.1% (=1 g/l) 0.588, assuming all CYS residues are reduced |
| Aromaticity: | 0.029 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.65 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.36, 26.09, 23.19] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.9854 |
| Grand average of hydropathicity (GRAVY): | 0.05 |