Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5639 |
| Number of amino acids: | 317 |
| Molecular Weight: | 34291.7 Da |
| Theoretical pI: | 8.62 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 9.46% |
| Cysteine CYS (C) | 2 | 0.63% |
| Glutamic Acid GLU (E) | 20 | 6.31% |
| Aspartic Acid ASP (D) | 9 | 2.84% |
| Glycine GLY (G) | 26 | 8.2% |
| Phynylalanine PHE (F) | 12 | 3.79% |
| Isoleucine ILE (I) | 17 | 5.36% |
| Histidine HIS (H) | 1 | 0.32% |
| Lysine LYS (K) | 25 | 7.89% |
| Methionine MET (M) | 5 | 1.58% |
| Leucine LEU (L) | 28 | 8.83% |
| Asparagine ASN (N) | 21 | 6.62% |
| Glutamine GLN (Q) | 20 | 6.31% |
| Proline PRO (P) | 24 | 7.57% |
| Serine SER (S) | 11 | 3.47% |
| Arginine ARG (R) | 7 | 2.21% |
| Threonine THR (T) | 10 | 3.15% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 37 | 11.67% |
| Tyrosine TYR (Y) | 12 | 3.79% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1555 |
| Hydrogen | H | 2484 |
| Nitrogen | N | 406 |
| Oxygen | O | 450 |
| Sulphur | S | 7 |
| Formula | C1555H2484N406O450S7 |
| Total Number of Atoms: | 4902 |
| Total number of positively charged residues (ARG + LYS): | 32 |
| Total number of negatively charged residues (ASP + GLU): | 29 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 18005 Absorption 0.1% (=1 g/l) 0.525, assuming all pairs of CYS residues form cystines Ext. coefficient 17880 Absorption 0.1% (=1 g/l) 0.521, assuming all CYS residues are reduced |
| Aromaticity: | 0.076 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.74 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.44, 25.87, 26.18] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 98.675 |
| Grand average of hydropathicity (GRAVY): | -0.05 |