Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5634 |
| Number of amino acids: | 261 |
| Molecular Weight: | 27748.18 Da |
| Theoretical pI: | 7.62 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 27 | 10.34% |
| Cysteine CYS (C) | 10 | 3.83% |
| Glutamic Acid GLU (E) | 3 | 1.15% |
| Aspartic Acid ASP (D) | 11 | 4.21% |
| Glycine GLY (G) | 32 | 12.26% |
| Phynylalanine PHE (F) | 14 | 5.36% |
| Isoleucine ILE (I) | 8 | 3.07% |
| Histidine HIS (H) | 1 | 0.38% |
| Lysine LYS (K) | 5 | 1.92% |
| Methionine MET (M) | 7 | 2.68% |
| Leucine LEU (L) | 17 | 6.51% |
| Asparagine ASN (N) | 13 | 4.98% |
| Glutamine GLN (Q) | 12 | 4.6% |
| Proline PRO (P) | 9 | 3.45% |
| Serine SER (S) | 26 | 9.96% |
| Arginine ARG (R) | 10 | 3.83% |
| Threonine THR (T) | 21 | 8.05% |
| Tryptophan TRP (W) | 8 | 3.07% |
| Valine VAL (V) | 16 | 6.13% |
| Tyrosine TYR (Y) | 11 | 4.21% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1227 |
| Hydrogen | H | 1847 |
| Nitrogen | N | 331 |
| Oxygen | O | 373 |
| Sulphur | S | 17 |
| Formula | C1227H1847N331O373S17 |
| Total Number of Atoms: | 3795 |
| Total number of positively charged residues (ARG + LYS): | 15 |
| Total number of negatively charged residues (ASP + GLU): | 14 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 61015 Absorption 0.1% (=1 g/l) 2.199, assuming all pairs of CYS residues form cystines Ext. coefficient 60390 Absorption 0.1% (=1 g/l) 2.176, assuming all CYS residues are reduced |
| Aromaticity: | 0.126 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.30 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.35, 30.65, 20.69] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 65.4789 |
| Grand average of hydropathicity (GRAVY): | 0.02 |