Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5630 |
| Number of amino acids: | 493 |
| Molecular Weight: | 55686.94 Da |
| Theoretical pI: | 8.26 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 38 | 7.71% |
| Cysteine CYS (C) | 6 | 1.22% |
| Glutamic Acid GLU (E) | 31 | 6.29% |
| Aspartic Acid ASP (D) | 16 | 3.25% |
| Glycine GLY (G) | 35 | 7.1% |
| Phynylalanine PHE (F) | 25 | 5.07% |
| Isoleucine ILE (I) | 24 | 4.87% |
| Histidine HIS (H) | 8 | 1.62% |
| Lysine LYS (K) | 10 | 2.03% |
| Methionine MET (M) | 3 | 0.61% |
| Leucine LEU (L) | 37 | 7.51% |
| Asparagine ASN (N) | 34 | 6.9% |
| Glutamine GLN (Q) | 69 | 14% |
| Proline PRO (P) | 22 | 4.46% |
| Serine SER (S) | 31 | 6.29% |
| Arginine ARG (R) | 39 | 7.91% |
| Threonine THR (T) | 23 | 4.67% |
| Tryptophan TRP (W) | 8 | 1.62% |
| Valine VAL (V) | 29 | 5.88% |
| Tyrosine TYR (Y) | 5 | 1.01% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2423 |
| Hydrogen | H | 3803 |
| Nitrogen | N | 747 |
| Oxygen | O | 750 |
| Sulphur | S | 9 |
| Formula | C2423H3803N747O750S9 |
| Total Number of Atoms: | 7732 |
| Total number of positively charged residues (ARG + LYS): | 49 |
| Total number of negatively charged residues (ASP + GLU): | 47 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 51825 Absorption 0.1% (=1 g/l) 0.931, assuming all pairs of CYS residues form cystines Ext. coefficient 51450 Absorption 0.1% (=1 g/l) 0.924, assuming all CYS residues are reduced |
| Aromaticity: | 0.077 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 56.63 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.96, 24.75, 22.11] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 73.0223 |
| Grand average of hydropathicity (GRAVY): | -0.69 |