Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5619 |
| Number of amino acids: | 276 |
| Molecular Weight: | 29726.06 Da |
| Theoretical pI: | 8.92 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 28 | 10.14% |
| Cysteine CYS (C) | 10 | 3.62% |
| Glutamic Acid GLU (E) | 9 | 3.26% |
| Aspartic Acid ASP (D) | 15 | 5.43% |
| Glycine GLY (G) | 31 | 11.23% |
| Phynylalanine PHE (F) | 9 | 3.26% |
| Isoleucine ILE (I) | 7 | 2.54% |
| Histidine HIS (H) | 3 | 1.09% |
| Lysine LYS (K) | 11 | 3.99% |
| Methionine MET (M) | 7 | 2.54% |
| Leucine LEU (L) | 28 | 10.14% |
| Asparagine ASN (N) | 10 | 3.62% |
| Glutamine GLN (Q) | 9 | 3.26% |
| Proline PRO (P) | 15 | 5.43% |
| Serine SER (S) | 22 | 7.97% |
| Arginine ARG (R) | 20 | 7.25% |
| Threonine THR (T) | 8 | 2.9% |
| Tryptophan TRP (W) | 6 | 2.17% |
| Valine VAL (V) | 20 | 7.25% |
| Tyrosine TYR (Y) | 8 | 2.9% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1307 |
| Hydrogen | H | 2060 |
| Nitrogen | N | 378 |
| Oxygen | O | 382 |
| Sulphur | S | 17 |
| Formula | C1307H2060N378O382S17 |
| Total Number of Atoms: | 4144 |
| Total number of positively charged residues (ARG + LYS): | 31 |
| Total number of negatively charged residues (ASP + GLU): | 24 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 45545 Absorption 0.1% (=1 g/l) 1.532, assuming all pairs of CYS residues form cystines Ext. coefficient 44920 Absorption 0.1% (=1 g/l) 1.511, assuming all CYS residues are reduced |
| Aromaticity: | 0.083 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.41 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.26, 28.26, 26.09] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 80.6158 |
| Grand average of hydropathicity (GRAVY): | -0.12 |