Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5617 |
| Number of amino acids: | 291 |
| Molecular Weight: | 31283.23 Da |
| Theoretical pI: | 4.89 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 29 | 9.97% |
| Cysteine CYS (C) | 6 | 2.06% |
| Glutamic Acid GLU (E) | 4 | 1.37% |
| Aspartic Acid ASP (D) | 16 | 5.5% |
| Glycine GLY (G) | 33 | 11.34% |
| Phynylalanine PHE (F) | 13 | 4.47% |
| Isoleucine ILE (I) | 14 | 4.81% |
| Histidine HIS (H) | 2 | 0.69% |
| Lysine LYS (K) | 10 | 3.44% |
| Methionine MET (M) | 3 | 1.03% |
| Leucine LEU (L) | 32 | 11% |
| Asparagine ASN (N) | 26 | 8.93% |
| Glutamine GLN (Q) | 16 | 5.5% |
| Proline PRO (P) | 12 | 4.12% |
| Serine SER (S) | 20 | 6.87% |
| Arginine ARG (R) | 5 | 1.72% |
| Threonine THR (T) | 11 | 3.78% |
| Tryptophan TRP (W) | 8 | 2.75% |
| Valine VAL (V) | 17 | 5.84% |
| Tyrosine TYR (Y) | 14 | 4.81% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1412 |
| Hydrogen | H | 2132 |
| Nitrogen | N | 370 |
| Oxygen | O | 419 |
| Sulphur | S | 9 |
| Formula | C1412H2132N370O419S9 |
| Total Number of Atoms: | 4342 |
| Total number of positively charged residues (ARG + LYS): | 15 |
| Total number of negatively charged residues (ASP + GLU): | 20 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 65235 Absorption 0.1% (=1 g/l) 2.085, assuming all pairs of CYS residues form cystines Ext. coefficient 64860 Absorption 0.1% (=1 g/l) 2.073, assuming all CYS residues are reduced |
| Aromaticity: | 0.120 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 27.76 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.68, 31.27, 23.37] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 88.5568 |
| Grand average of hydropathicity (GRAVY): | -0.00 |