Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5616 |
| Number of amino acids: | 260 |
| Molecular Weight: | 27997.97 Da |
| Theoretical pI: | 7.65 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 22 | 8.46% |
| Cysteine CYS (C) | 10 | 3.85% |
| Glutamic Acid GLU (E) | 11 | 4.23% |
| Aspartic Acid ASP (D) | 12 | 4.62% |
| Glycine GLY (G) | 37 | 14.23% |
| Phynylalanine PHE (F) | 14 | 5.38% |
| Isoleucine ILE (I) | 7 | 2.69% |
| Histidine HIS (H) | 3 | 1.15% |
| Lysine LYS (K) | 7 | 2.69% |
| Methionine MET (M) | 6 | 2.31% |
| Leucine LEU (L) | 23 | 8.85% |
| Asparagine ASN (N) | 8 | 3.08% |
| Glutamine GLN (Q) | 7 | 2.69% |
| Proline PRO (P) | 9 | 3.46% |
| Serine SER (S) | 17 | 6.54% |
| Arginine ARG (R) | 17 | 6.54% |
| Threonine THR (T) | 12 | 4.62% |
| Tryptophan TRP (W) | 7 | 2.69% |
| Valine VAL (V) | 23 | 8.85% |
| Tyrosine TYR (Y) | 8 | 3.08% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1246 |
| Hydrogen | H | 1914 |
| Nitrogen | N | 346 |
| Oxygen | O | 359 |
| Sulphur | S | 16 |
| Formula | C1246H1914N346O359S16 |
| Total Number of Atoms: | 3881 |
| Total number of positively charged residues (ARG + LYS): | 24 |
| Total number of negatively charged residues (ASP + GLU): | 23 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 51045 Absorption 0.1% (=1 g/l) 1.823, assuming all pairs of CYS residues form cystines Ext. coefficient 50420 Absorption 0.1% (=1 g/l) 1.801, assuming all CYS residues are reduced |
| Aromaticity: | 0.112 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 27.59 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.54, 27.31, 23.85] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.1154 |
| Grand average of hydropathicity (GRAVY): | 0.06 |