Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5615 |
| Number of amino acids: | 312 |
| Molecular Weight: | 32381.58 Da |
| Theoretical pI: | 8.39 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 12.5% |
| Cysteine CYS (C) | 9 | 2.88% |
| Glutamic Acid GLU (E) | 4 | 1.28% |
| Aspartic Acid ASP (D) | 15 | 4.81% |
| Glycine GLY (G) | 24 | 7.69% |
| Phynylalanine PHE (F) | 12 | 3.85% |
| Isoleucine ILE (I) | 11 | 3.53% |
| Histidine HIS (H) | 4 | 1.28% |
| Lysine LYS (K) | 10 | 3.21% |
| Methionine MET (M) | 8 | 2.56% |
| Leucine LEU (L) | 31 | 9.94% |
| Asparagine ASN (N) | 23 | 7.37% |
| Glutamine GLN (Q) | 11 | 3.53% |
| Proline PRO (P) | 10 | 3.21% |
| Serine SER (S) | 37 | 11.86% |
| Arginine ARG (R) | 12 | 3.85% |
| Threonine THR (T) | 27 | 8.65% |
| Tryptophan TRP (W) | 1 | 0.32% |
| Valine VAL (V) | 20 | 6.41% |
| Tyrosine TYR (Y) | 4 | 1.28% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1391 |
| Hydrogen | H | 2247 |
| Nitrogen | N | 401 |
| Oxygen | O | 453 |
| Sulphur | S | 17 |
| Formula | C1391H2247N401O453S17 |
| Total Number of Atoms: | 4509 |
| Total number of positively charged residues (ARG + LYS): | 22 |
| Total number of negatively charged residues (ASP + GLU): | 19 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 11960 Absorption 0.1% (=1 g/l) 0.369, assuming all pairs of CYS residues form cystines Ext. coefficient 11460 Absorption 0.1% (=1 g/l) 0.354, assuming all CYS residues are reduced |
| Aromaticity: | 0.054 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.44 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.32, 30.13, 26.28] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.5898 |
| Grand average of hydropathicity (GRAVY): | 0.07 |