Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5601 |
| Number of amino acids: | 318 |
| Molecular Weight: | 34928.35 Da |
| Theoretical pI: | 9.12 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 19 | 5.97% |
| Cysteine CYS (C) | 2 | 0.63% |
| Glutamic Acid GLU (E) | 18 | 5.66% |
| Aspartic Acid ASP (D) | 12 | 3.77% |
| Glycine GLY (G) | 26 | 8.18% |
| Phynylalanine PHE (F) | 13 | 4.09% |
| Isoleucine ILE (I) | 30 | 9.43% |
| Histidine HIS (H) | 2 | 0.63% |
| Lysine LYS (K) | 22 | 6.92% |
| Methionine MET (M) | 4 | 1.26% |
| Leucine LEU (L) | 25 | 7.86% |
| Asparagine ASN (N) | 17 | 5.35% |
| Glutamine GLN (Q) | 16 | 5.03% |
| Proline PRO (P) | 24 | 7.55% |
| Serine SER (S) | 21 | 6.6% |
| Arginine ARG (R) | 14 | 4.4% |
| Threonine THR (T) | 14 | 4.4% |
| Tryptophan TRP (W) | 1 | 0.31% |
| Valine VAL (V) | 27 | 8.49% |
| Tyrosine TYR (Y) | 11 | 3.46% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1580 |
| Hydrogen | H | 2528 |
| Nitrogen | N | 420 |
| Oxygen | O | 458 |
| Sulphur | S | 6 |
| Formula | C1580H2528N420O458S6 |
| Total Number of Atoms: | 4992 |
| Total number of positively charged residues (ARG + LYS): | 36 |
| Total number of negatively charged residues (ASP + GLU): | 30 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 22015 Absorption 0.1% (=1 g/l) 0.630, assuming all pairs of CYS residues form cystines Ext. coefficient 21890 Absorption 0.1% (=1 g/l) 0.627, assuming all CYS residues are reduced |
| Aromaticity: | 0.079 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 32.69 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.65, 27.67, 20.75] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 98.0503 |
| Grand average of hydropathicity (GRAVY): | -0.12 |