Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5598 |
| Number of amino acids: | 263 |
| Molecular Weight: | 28457.24 Da |
| Theoretical pI: | 6.16 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 18 | 6.84% |
| Cysteine CYS (C) | 7 | 2.66% |
| Glutamic Acid GLU (E) | 18 | 6.84% |
| Aspartic Acid ASP (D) | 17 | 6.46% |
| Glycine GLY (G) | 31 | 11.79% |
| Phynylalanine PHE (F) | 10 | 3.8% |
| Isoleucine ILE (I) | 11 | 4.18% |
| Histidine HIS (H) | 4 | 1.52% |
| Lysine LYS (K) | 27 | 10.27% |
| Methionine MET (M) | 3 | 1.14% |
| Leucine LEU (L) | 14 | 5.32% |
| Asparagine ASN (N) | 7 | 2.66% |
| Glutamine GLN (Q) | 2 | 0.76% |
| Proline PRO (P) | 18 | 6.84% |
| Serine SER (S) | 16 | 6.08% |
| Arginine ARG (R) | 6 | 2.28% |
| Threonine THR (T) | 18 | 6.84% |
| Tryptophan TRP (W) | 6 | 2.28% |
| Valine VAL (V) | 20 | 7.6% |
| Tyrosine TYR (Y) | 10 | 3.8% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1276 |
| Hydrogen | H | 1967 |
| Nitrogen | N | 331 |
| Oxygen | O | 387 |
| Sulphur | S | 10 |
| Formula | C1276H1967N331O387S10 |
| Total Number of Atoms: | 3971 |
| Total number of positively charged residues (ARG + LYS): | 33 |
| Total number of negatively charged residues (ASP + GLU): | 35 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 48275 Absorption 0.1% (=1 g/l) 1.696, assuming all pairs of CYS residues form cystines Ext. coefficient 47900 Absorption 0.1% (=1 g/l) 1.683, assuming all CYS residues are reduced |
| Aromaticity: | 0.099 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 28.33 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.00, 27.38, 20.15] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 65.9696 |
| Grand average of hydropathicity (GRAVY): | -0.43 |