Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5580 |
| Number of amino acids: | 213 |
| Molecular Weight: | 22410.82 Da |
| Theoretical pI: | 5.65 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 24 | 11.27% |
| Cysteine CYS (C) | 9 | 4.23% |
| Glutamic Acid GLU (E) | 12 | 5.63% |
| Aspartic Acid ASP (D) | 9 | 4.23% |
| Glycine GLY (G) | 16 | 7.51% |
| Phynylalanine PHE (F) | 8 | 3.76% |
| Isoleucine ILE (I) | 13 | 6.1% |
| Histidine HIS (H) | 6 | 2.82% |
| Lysine LYS (K) | 11 | 5.16% |
| Methionine MET (M) | 5 | 2.35% |
| Leucine LEU (L) | 21 | 9.86% |
| Asparagine ASN (N) | 11 | 5.16% |
| Glutamine GLN (Q) | 5 | 2.35% |
| Proline PRO (P) | 17 | 7.98% |
| Serine SER (S) | 16 | 7.51% |
| Arginine ARG (R) | 5 | 2.35% |
| Threonine THR (T) | 10 | 4.69% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 13 | 6.1% |
| Tyrosine TYR (Y) | 2 | 0.94% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 985 |
| Hydrogen | H | 1579 |
| Nitrogen | N | 267 |
| Oxygen | O | 300 |
| Sulphur | S | 14 |
| Formula | C985H1579N267O300S14 |
| Total Number of Atoms: | 3145 |
| Total number of positively charged residues (ARG + LYS): | 16 |
| Total number of negatively charged residues (ASP + GLU): | 21 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 3480 Absorption 0.1% (=1 g/l) 0.155, assuming all pairs of CYS residues form cystines Ext. coefficient 2980 Absorption 0.1% (=1 g/l) 0.133, assuming all CYS residues are reduced |
| Aromaticity: | 0.047 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.39 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.76, 28.17, 29.11] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 91.2207 |
| Grand average of hydropathicity (GRAVY): | 0.10 |