Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5577 |
| Number of amino acids: | 194 |
| Molecular Weight: | 19900.12 Da |
| Theoretical pI: | 6.28 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 13 | 6.7% |
| Cysteine CYS (C) | 9 | 4.64% |
| Glutamic Acid GLU (E) | 2 | 1.03% |
| Aspartic Acid ASP (D) | 7 | 3.61% |
| Glycine GLY (G) | 23 | 11.86% |
| Phynylalanine PHE (F) | 8 | 4.12% |
| Isoleucine ILE (I) | 2 | 1.03% |
| Histidine HIS (H) | 3 | 1.55% |
| Lysine LYS (K) | 7 | 3.61% |
| Methionine MET (M) | 4 | 2.06% |
| Leucine LEU (L) | 19 | 9.79% |
| Asparagine ASN (N) | 14 | 7.22% |
| Glutamine GLN (Q) | 3 | 1.55% |
| Proline PRO (P) | 12 | 6.19% |
| Serine SER (S) | 27 | 13.92% |
| Arginine ARG (R) | 1 | 0.52% |
| Threonine THR (T) | 24 | 12.37% |
| Tryptophan TRP (W) | 1 | 0.52% |
| Valine VAL (V) | 7 | 3.61% |
| Tyrosine TYR (Y) | 8 | 4.12% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 860 |
| Hydrogen | H | 1326 |
| Nitrogen | N | 228 |
| Oxygen | O | 289 |
| Sulphur | S | 13 |
| Formula | C860H1326N228O289S13 |
| Total Number of Atoms: | 2716 |
| Total number of positively charged residues (ARG + LYS): | 8 |
| Total number of negatively charged residues (ASP + GLU): | 9 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 17920 Absorption 0.1% (=1 g/l) 0.900, assuming all pairs of CYS residues form cystines Ext. coefficient 17420 Absorption 0.1% (=1 g/l) 0.875, assuming all CYS residues are reduced |
| Aromaticity: | 0.088 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 31.17 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [23.20, 39.18, 19.59] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 59.3814 |
| Grand average of hydropathicity (GRAVY): | -0.12 |