Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5565 |
| Number of amino acids: | 316 |
| Molecular Weight: | 35046.1 Da |
| Theoretical pI: | 4.4 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 19 | 6.01% |
| Cysteine CYS (C) | 19 | 6.01% |
| Glutamic Acid GLU (E) | 18 | 5.7% |
| Aspartic Acid ASP (D) | 21 | 6.65% |
| Glycine GLY (G) | 31 | 9.81% |
| Phynylalanine PHE (F) | 15 | 4.75% |
| Isoleucine ILE (I) | 7 | 2.22% |
| Histidine HIS (H) | 2 | 0.63% |
| Lysine LYS (K) | 9 | 2.85% |
| Methionine MET (M) | 9 | 2.85% |
| Leucine LEU (L) | 27 | 8.54% |
| Asparagine ASN (N) | 20 | 6.33% |
| Glutamine GLN (Q) | 12 | 3.8% |
| Proline PRO (P) | 16 | 5.06% |
| Serine SER (S) | 21 | 6.65% |
| Arginine ARG (R) | 12 | 3.8% |
| Threonine THR (T) | 22 | 6.96% |
| Tryptophan TRP (W) | 6 | 1.9% |
| Valine VAL (V) | 12 | 3.8% |
| Tyrosine TYR (Y) | 18 | 5.7% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1531 |
| Hydrogen | H | 2289 |
| Nitrogen | N | 403 |
| Oxygen | O | 488 |
| Sulphur | S | 28 |
| Formula | C1531H2289N403O488S28 |
| Total Number of Atoms: | 4739 |
| Total number of positively charged residues (ARG + LYS): | 21 |
| Total number of negatively charged residues (ASP + GLU): | 39 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 60945 Absorption 0.1% (=1 g/l) 1.739, assuming all pairs of CYS residues form cystines Ext. coefficient 59820 Absorption 0.1% (=1 g/l) 1.707, assuming all CYS residues are reduced |
| Aromaticity: | 0.123 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.83 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.90, 27.85, 23.10] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 58.9873 |
| Grand average of hydropathicity (GRAVY): | -0.37 |