Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5561 |
| Number of amino acids: | 97 |
| Molecular Weight: | 11114.71 Da |
| Theoretical pI: | 8.8 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 1 | 1.03% |
| Cysteine CYS (C) | 9 | 9.28% |
| Glutamic Acid GLU (E) | 4 | 4.12% |
| Aspartic Acid ASP (D) | 3 | 3.09% |
| Glycine GLY (G) | 10 | 10.31% |
| Phynylalanine PHE (F) | 7 | 7.22% |
| Isoleucine ILE (I) | 5 | 5.15% |
| Histidine HIS (H) | 2 | 2.06% |
| Lysine LYS (K) | 5 | 5.15% |
| Methionine MET (M) | 1 | 1.03% |
| Leucine LEU (L) | 7 | 7.22% |
| Asparagine ASN (N) | 6 | 6.19% |
| Glutamine GLN (Q) | 5 | 5.15% |
| Proline PRO (P) | 4 | 4.12% |
| Serine SER (S) | 8 | 8.25% |
| Arginine ARG (R) | 7 | 7.22% |
| Threonine THR (T) | 4 | 4.12% |
| Tryptophan TRP (W) | 2 | 2.06% |
| Valine VAL (V) | 3 | 3.09% |
| Tyrosine TYR (Y) | 4 | 4.12% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 488 |
| Hydrogen | H | 742 |
| Nitrogen | N | 140 |
| Oxygen | O | 139 |
| Sulphur | S | 10 |
| Formula | C488H742N140O139S10 |
| Total Number of Atoms: | 1519 |
| Total number of positively charged residues (ARG + LYS): | 12 |
| Total number of negatively charged residues (ASP + GLU): | 7 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 17460 Absorption 0.1% (=1 g/l) 1.571, assuming all pairs of CYS residues form cystines Ext. coefficient 16960 Absorption 0.1% (=1 g/l) 1.526, assuming all CYS residues are reduced |
| Aromaticity: | 0.134 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.84 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.87, 28.87, 13.40] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 58.2474 |
| Grand average of hydropathicity (GRAVY): | -0.41 |