Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5557 |
| Number of amino acids: | 274 |
| Molecular Weight: | 31494.81 Da |
| Theoretical pI: | 6.28 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 10 | 3.65% |
| Cysteine CYS (C) | 2 | 0.73% |
| Glutamic Acid GLU (E) | 21 | 7.66% |
| Aspartic Acid ASP (D) | 16 | 5.84% |
| Glycine GLY (G) | 19 | 6.93% |
| Phynylalanine PHE (F) | 12 | 4.38% |
| Isoleucine ILE (I) | 24 | 8.76% |
| Histidine HIS (H) | 8 | 2.92% |
| Lysine LYS (K) | 19 | 6.93% |
| Methionine MET (M) | 5 | 1.82% |
| Leucine LEU (L) | 24 | 8.76% |
| Asparagine ASN (N) | 17 | 6.2% |
| Glutamine GLN (Q) | 11 | 4.01% |
| Proline PRO (P) | 13 | 4.74% |
| Serine SER (S) | 17 | 6.2% |
| Arginine ARG (R) | 15 | 5.47% |
| Threonine THR (T) | 13 | 4.74% |
| Tryptophan TRP (W) | 5 | 1.82% |
| Valine VAL (V) | 14 | 5.11% |
| Tyrosine TYR (Y) | 9 | 3.28% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1413 |
| Hydrogen | H | 2205 |
| Nitrogen | N | 387 |
| Oxygen | O | 416 |
| Sulphur | S | 7 |
| Formula | C1413H2205N387O416S7 |
| Total Number of Atoms: | 4428 |
| Total number of positively charged residues (ARG + LYS): | 34 |
| Total number of negatively charged residues (ASP + GLU): | 37 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 41035 Absorption 0.1% (=1 g/l) 1.303, assuming all pairs of CYS residues form cystines Ext. coefficient 40910 Absorption 0.1% (=1 g/l) 1.299, assuming all CYS residues are reduced |
| Aromaticity: | 0.095 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 39.63 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.12, 24.09, 21.90] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 86.7883 |
| Grand average of hydropathicity (GRAVY): | -0.50 |