Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5554 |
| Number of amino acids: | 355 |
| Molecular Weight: | 37812.24 Da |
| Theoretical pI: | 6.23 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 34 | 9.58% |
| Cysteine CYS (C) | 10 | 2.82% |
| Glutamic Acid GLU (E) | 15 | 4.23% |
| Aspartic Acid ASP (D) | 13 | 3.66% |
| Glycine GLY (G) | 33 | 9.3% |
| Phynylalanine PHE (F) | 17 | 4.79% |
| Isoleucine ILE (I) | 27 | 7.61% |
| Histidine HIS (H) | 16 | 4.51% |
| Lysine LYS (K) | 13 | 3.66% |
| Methionine MET (M) | 16 | 4.51% |
| Leucine LEU (L) | 43 | 12.11% |
| Asparagine ASN (N) | 7 | 1.97% |
| Glutamine GLN (Q) | 8 | 2.25% |
| Proline PRO (P) | 10 | 2.82% |
| Serine SER (S) | 34 | 9.58% |
| Arginine ARG (R) | 9 | 2.54% |
| Threonine THR (T) | 18 | 5.07% |
| Tryptophan TRP (W) | 2 | 0.56% |
| Valine VAL (V) | 25 | 7.04% |
| Tyrosine TYR (Y) | 5 | 1.41% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1690 |
| Hydrogen | H | 2696 |
| Nitrogen | N | 444 |
| Oxygen | O | 484 |
| Sulphur | S | 26 |
| Formula | C1690H2696N444O484S26 |
| Total Number of Atoms: | 5340 |
| Total number of positively charged residues (ARG + LYS): | 22 |
| Total number of negatively charged residues (ASP + GLU): | 28 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 19075 Absorption 0.1% (=1 g/l) 0.504, assuming all pairs of CYS residues form cystines Ext. coefficient 18450 Absorption 0.1% (=1 g/l) 0.488, assuming all CYS residues are reduced |
| Aromaticity: | 0.068 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.52 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.52, 23.66, 30.42] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 106.901 |
| Grand average of hydropathicity (GRAVY): | 0.52 |