Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5553 |
| Number of amino acids: | 222 |
| Molecular Weight: | 23925.47 Da |
| Theoretical pI: | 6.56 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 16 | 7.21% |
| Cysteine CYS (C) | 2 | 0.9% |
| Glutamic Acid GLU (E) | 4 | 1.8% |
| Aspartic Acid ASP (D) | 12 | 5.41% |
| Glycine GLY (G) | 18 | 8.11% |
| Phynylalanine PHE (F) | 17 | 7.66% |
| Isoleucine ILE (I) | 14 | 6.31% |
| Histidine HIS (H) | 5 | 2.25% |
| Lysine LYS (K) | 8 | 3.6% |
| Methionine MET (M) | 3 | 1.35% |
| Leucine LEU (L) | 18 | 8.11% |
| Asparagine ASN (N) | 17 | 7.66% |
| Glutamine GLN (Q) | 10 | 4.5% |
| Proline PRO (P) | 16 | 7.21% |
| Serine SER (S) | 15 | 6.76% |
| Arginine ARG (R) | 7 | 3.15% |
| Threonine THR (T) | 8 | 3.6% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 28 | 12.61% |
| Tyrosine TYR (Y) | 4 | 1.8% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1089 |
| Hydrogen | H | 1694 |
| Nitrogen | N | 288 |
| Oxygen | O | 309 |
| Sulphur | S | 5 |
| Formula | C1089H1694N288O309S5 |
| Total Number of Atoms: | 3385 |
| Total number of positively charged residues (ARG + LYS): | 15 |
| Total number of negatively charged residues (ASP + GLU): | 16 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 6085 Absorption 0.1% (=1 g/l) 0.254, assuming all pairs of CYS residues form cystines Ext. coefficient 5960 Absorption 0.1% (=1 g/l) 0.249, assuming all CYS residues are reduced |
| Aromaticity: | 0.095 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 23.90 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [36.49, 29.73, 18.47] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 100 |
| Grand average of hydropathicity (GRAVY): | 0.23 |