Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5542 |
| Number of amino acids: | 190 |
| Molecular Weight: | 21153.7 Da |
| Theoretical pI: | 6.31 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 12 | 6.32% |
| Cysteine CYS (C) | 2 | 1.05% |
| Glutamic Acid GLU (E) | 5 | 2.63% |
| Aspartic Acid ASP (D) | 13 | 6.84% |
| Glycine GLY (G) | 12 | 6.32% |
| Phynylalanine PHE (F) | 14 | 7.37% |
| Isoleucine ILE (I) | 12 | 6.32% |
| Histidine HIS (H) | 6 | 3.16% |
| Lysine LYS (K) | 9 | 4.74% |
| Methionine MET (M) | 1 | 0.53% |
| Leucine LEU (L) | 17 | 8.95% |
| Asparagine ASN (N) | 10 | 5.26% |
| Glutamine GLN (Q) | 6 | 3.16% |
| Proline PRO (P) | 8 | 4.21% |
| Serine SER (S) | 25 | 13.16% |
| Arginine ARG (R) | 7 | 3.68% |
| Threonine THR (T) | 10 | 5.26% |
| Tryptophan TRP (W) | 2 | 1.05% |
| Valine VAL (V) | 10 | 5.26% |
| Tyrosine TYR (Y) | 9 | 4.74% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 958 |
| Hydrogen | H | 1446 |
| Nitrogen | N | 250 |
| Oxygen | O | 287 |
| Sulphur | S | 3 |
| Formula | C958H1446N250O287S3 |
| Total Number of Atoms: | 2944 |
| Total number of positively charged residues (ARG + LYS): | 16 |
| Total number of negatively charged residues (ASP + GLU): | 18 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 24535 Absorption 0.1% (=1 g/l) 1.160, assuming all pairs of CYS residues form cystines Ext. coefficient 24410 Absorption 0.1% (=1 g/l) 1.154, assuming all CYS residues are reduced |
| Aromaticity: | 0.132 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.12 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.68, 28.95, 18.42] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 81.1053 |
| Grand average of hydropathicity (GRAVY): | -0.18 |