Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5532 |
| Number of amino acids: | 196 |
| Molecular Weight: | 20053.55 Da |
| Theoretical pI: | 4.68 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 25 | 12.76% |
| Cysteine CYS (C) | 3 | 1.53% |
| Glutamic Acid GLU (E) | 9 | 4.59% |
| Aspartic Acid ASP (D) | 9 | 4.59% |
| Glycine GLY (G) | 23 | 11.73% |
| Phynylalanine PHE (F) | 14 | 7.14% |
| Isoleucine ILE (I) | 4 | 2.04% |
| Histidine HIS (H) | 3 | 1.53% |
| Lysine LYS (K) | 6 | 3.06% |
| Methionine MET (M) | 4 | 2.04% |
| Leucine LEU (L) | 8 | 4.08% |
| Asparagine ASN (N) | 3 | 1.53% |
| Glutamine GLN (Q) | 2 | 1.02% |
| Proline PRO (P) | 14 | 7.14% |
| Serine SER (S) | 11 | 5.61% |
| Arginine ARG (R) | 4 | 2.04% |
| Threonine THR (T) | 28 | 14.29% |
| Tryptophan TRP (W) | 2 | 1.02% |
| Valine VAL (V) | 21 | 10.71% |
| Tyrosine TYR (Y) | 3 | 1.53% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 898 |
| Hydrogen | H | 1373 |
| Nitrogen | N | 227 |
| Oxygen | O | 280 |
| Sulphur | S | 7 |
| Formula | C898H1373N227O280S7 |
| Total Number of Atoms: | 2785 |
| Total number of positively charged residues (ARG + LYS): | 10 |
| Total number of negatively charged residues (ASP + GLU): | 18 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 15595 Absorption 0.1% (=1 g/l) 0.778, assuming all pairs of CYS residues form cystines Ext. coefficient 15470 Absorption 0.1% (=1 g/l) 0.771, assuming all CYS residues are reduced |
| Aromaticity: | 0.097 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 21.43 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.53, 26.02, 23.47] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 67.7041 |
| Grand average of hydropathicity (GRAVY): | 0.20 |