Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5528 |
| Number of amino acids: | 452 |
| Molecular Weight: | 51521.47 Da |
| Theoretical pI: | 6.45 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 7.3% |
| Cysteine CYS (C) | 7 | 1.55% |
| Glutamic Acid GLU (E) | 26 | 5.75% |
| Aspartic Acid ASP (D) | 20 | 4.42% |
| Glycine GLY (G) | 33 | 7.3% |
| Phynylalanine PHE (F) | 26 | 5.75% |
| Isoleucine ILE (I) | 22 | 4.87% |
| Histidine HIS (H) | 15 | 3.32% |
| Lysine LYS (K) | 21 | 4.65% |
| Methionine MET (M) | 7 | 1.55% |
| Leucine LEU (L) | 42 | 9.29% |
| Asparagine ASN (N) | 18 | 3.98% |
| Glutamine GLN (Q) | 11 | 2.43% |
| Proline PRO (P) | 29 | 6.42% |
| Serine SER (S) | 37 | 8.19% |
| Arginine ARG (R) | 21 | 4.65% |
| Threonine THR (T) | 19 | 4.2% |
| Tryptophan TRP (W) | 14 | 3.1% |
| Valine VAL (V) | 23 | 5.09% |
| Tyrosine TYR (Y) | 28 | 6.19% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2371 |
| Hydrogen | H | 3509 |
| Nitrogen | N | 609 |
| Oxygen | O | 658 |
| Sulphur | S | 14 |
| Formula | C2371H3509N609O658S14 |
| Total Number of Atoms: | 7161 |
| Total number of positively charged residues (ARG + LYS): | 42 |
| Total number of negatively charged residues (ASP + GLU): | 46 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 119095 Absorption 0.1% (=1 g/l) 2.312, assuming all pairs of CYS residues form cystines Ext. coefficient 118720 Absorption 0.1% (=1 g/l) 2.304, assuming all CYS residues are reduced |
| Aromaticity: | 0.150 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.99 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.29, 25.89, 23.89] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.2788 |
| Grand average of hydropathicity (GRAVY): | -0.27 |