Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5514 |
| Number of amino acids: | 330 |
| Molecular Weight: | 36689.29 Da |
| Theoretical pI: | 8.26 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 10 | 3.03% |
| Cysteine CYS (C) | 11 | 3.33% |
| Glutamic Acid GLU (E) | 9 | 2.73% |
| Aspartic Acid ASP (D) | 18 | 5.45% |
| Glycine GLY (G) | 21 | 6.36% |
| Phynylalanine PHE (F) | 18 | 5.45% |
| Isoleucine ILE (I) | 22 | 6.67% |
| Histidine HIS (H) | 6 | 1.82% |
| Lysine LYS (K) | 21 | 6.36% |
| Methionine MET (M) | 4 | 1.21% |
| Leucine LEU (L) | 50 | 15.15% |
| Asparagine ASN (N) | 24 | 7.27% |
| Glutamine GLN (Q) | 12 | 3.64% |
| Proline PRO (P) | 19 | 5.76% |
| Serine SER (S) | 31 | 9.39% |
| Arginine ARG (R) | 9 | 2.73% |
| Threonine THR (T) | 26 | 7.88% |
| Tryptophan TRP (W) | 5 | 1.52% |
| Valine VAL (V) | 8 | 2.42% |
| Tyrosine TYR (Y) | 6 | 1.82% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1649 |
| Hydrogen | H | 2601 |
| Nitrogen | N | 431 |
| Oxygen | O | 484 |
| Sulphur | S | 15 |
| Formula | C1649H2601N431O484S15 |
| Total Number of Atoms: | 5180 |
| Total number of positively charged residues (ARG + LYS): | 30 |
| Total number of negatively charged residues (ASP + GLU): | 27 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 37065 Absorption 0.1% (=1 g/l) 1.010, assuming all pairs of CYS residues form cystines Ext. coefficient 36440 Absorption 0.1% (=1 g/l) 0.993, assuming all CYS residues are reduced |
| Aromaticity: | 0.088 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.84 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.03, 28.79, 22.12] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 95.1515 |
| Grand average of hydropathicity (GRAVY): | -0.09 |