Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5513 |
| Number of amino acids: | 319 |
| Molecular Weight: | 35264.08 Da |
| Theoretical pI: | 6.05 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 27 | 8.46% |
| Cysteine CYS (C) | 14 | 4.39% |
| Glutamic Acid GLU (E) | 23 | 7.21% |
| Aspartic Acid ASP (D) | 15 | 4.7% |
| Glycine GLY (G) | 22 | 6.9% |
| Phynylalanine PHE (F) | 14 | 4.39% |
| Isoleucine ILE (I) | 18 | 5.64% |
| Histidine HIS (H) | 16 | 5.02% |
| Lysine LYS (K) | 18 | 5.64% |
| Methionine MET (M) | 3 | 0.94% |
| Leucine LEU (L) | 32 | 10.03% |
| Asparagine ASN (N) | 11 | 3.45% |
| Glutamine GLN (Q) | 10 | 3.13% |
| Proline PRO (P) | 9 | 2.82% |
| Serine SER (S) | 26 | 8.15% |
| Arginine ARG (R) | 12 | 3.76% |
| Threonine THR (T) | 17 | 5.33% |
| Tryptophan TRP (W) | 2 | 0.63% |
| Valine VAL (V) | 19 | 5.96% |
| Tyrosine TYR (Y) | 11 | 3.45% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1560 |
| Hydrogen | H | 2432 |
| Nitrogen | N | 428 |
| Oxygen | O | 471 |
| Sulphur | S | 17 |
| Formula | C1560H2432N428O471S17 |
| Total Number of Atoms: | 4908 |
| Total number of positively charged residues (ARG + LYS): | 30 |
| Total number of negatively charged residues (ASP + GLU): | 38 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 28265 Absorption 0.1% (=1 g/l) 0.802, assuming all pairs of CYS residues form cystines Ext. coefficient 27390 Absorption 0.1% (=1 g/l) 0.777, assuming all CYS residues are reduced |
| Aromaticity: | 0.085 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 46.84 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.09, 21.32, 26.65] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 86.865 |
| Grand average of hydropathicity (GRAVY): | -0.14 |