Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5511 |
| Number of amino acids: | 295 |
| Molecular Weight: | 33379.11 Da |
| Theoretical pI: | 7.73 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 11 | 3.73% |
| Cysteine CYS (C) | 8 | 2.71% |
| Glutamic Acid GLU (E) | 6 | 2.03% |
| Aspartic Acid ASP (D) | 1 | 0.34% |
| Glycine GLY (G) | 10 | 3.39% |
| Phynylalanine PHE (F) | 13 | 4.41% |
| Isoleucine ILE (I) | 12 | 4.07% |
| Histidine HIS (H) | 4 | 1.36% |
| Lysine LYS (K) | 2 | 0.68% |
| Methionine MET (M) | 7 | 2.37% |
| Leucine LEU (L) | 30 | 10.17% |
| Asparagine ASN (N) | 3 | 1.02% |
| Glutamine GLN (Q) | 86 | 29.15% |
| Proline PRO (P) | 33 | 11.19% |
| Serine SER (S) | 23 | 7.8% |
| Arginine ARG (R) | 6 | 2.03% |
| Threonine THR (T) | 13 | 4.41% |
| Tryptophan TRP (W) | 1 | 0.34% |
| Valine VAL (V) | 21 | 7.12% |
| Tyrosine TYR (Y) | 5 | 1.69% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1476 |
| Hydrogen | H | 2327 |
| Nitrogen | N | 413 |
| Oxygen | O | 440 |
| Sulphur | S | 15 |
| Formula | C1476H2327N413O440S15 |
| Total Number of Atoms: | 4671 |
| Total number of positively charged residues (ARG + LYS): | 8 |
| Total number of negatively charged residues (ASP + GLU): | 7 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 13450 Absorption 0.1% (=1 g/l) 0.403, assuming all pairs of CYS residues form cystines Ext. coefficient 12950 Absorption 0.1% (=1 g/l) 0.388, assuming all CYS residues are reduced |
| Aromaticity: | 0.064 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 100.24 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.80, 23.39, 18.31] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.8983 |
| Grand average of hydropathicity (GRAVY): | -0.44 |