Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5506 |
| Number of amino acids: | 233 |
| Molecular Weight: | 25514.89 Da |
| Theoretical pI: | 8.55 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 14.16% |
| Cysteine CYS (C) | 3 | 1.29% |
| Glutamic Acid GLU (E) | 1 | 0.43% |
| Aspartic Acid ASP (D) | 1 | 0.43% |
| Glycine GLY (G) | 5 | 2.15% |
| Phynylalanine PHE (F) | 15 | 6.44% |
| Isoleucine ILE (I) | 10 | 4.29% |
| Histidine HIS (H) | 3 | 1.29% |
| Lysine LYS (K) | 1 | 0.43% |
| Methionine MET (M) | 4 | 1.72% |
| Leucine LEU (L) | 45 | 19.31% |
| Asparagine ASN (N) | 10 | 4.29% |
| Glutamine GLN (Q) | 38 | 16.31% |
| Proline PRO (P) | 21 | 9.01% |
| Serine SER (S) | 16 | 6.87% |
| Arginine ARG (R) | 3 | 1.29% |
| Threonine THR (T) | 7 | 3% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 9 | 3.86% |
| Tyrosine TYR (Y) | 8 | 3.43% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1182 |
| Hydrogen | H | 1847 |
| Nitrogen | N | 297 |
| Oxygen | O | 317 |
| Sulphur | S | 7 |
| Formula | C1182H1847N297O317S7 |
| Total Number of Atoms: | 3650 |
| Total number of positively charged residues (ARG + LYS): | 4 |
| Total number of negatively charged residues (ASP + GLU): | 2 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 12045 Absorption 0.1% (=1 g/l) 0.472, assuming all pairs of CYS residues form cystines Ext. coefficient 11920 Absorption 0.1% (=1 g/l) 0.467, assuming all CYS residues are reduced |
| Aromaticity: | 0.099 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 65.32 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [37.34, 22.32, 35.62] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 117.425 |
| Grand average of hydropathicity (GRAVY): | 0.45 |