Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5502 |
| Number of amino acids: | 431 |
| Molecular Weight: | 48572.98 Da |
| Theoretical pI: | 9.33 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 34 | 7.89% |
| Cysteine CYS (C) | 2 | 0.46% |
| Glutamic Acid GLU (E) | 14 | 3.25% |
| Aspartic Acid ASP (D) | 25 | 5.8% |
| Glycine GLY (G) | 36 | 8.35% |
| Phynylalanine PHE (F) | 27 | 6.26% |
| Isoleucine ILE (I) | 26 | 6.03% |
| Histidine HIS (H) | 10 | 2.32% |
| Lysine LYS (K) | 25 | 5.8% |
| Methionine MET (M) | 9 | 2.09% |
| Leucine LEU (L) | 32 | 7.42% |
| Asparagine ASN (N) | 23 | 5.34% |
| Glutamine GLN (Q) | 23 | 5.34% |
| Proline PRO (P) | 19 | 4.41% |
| Serine SER (S) | 36 | 8.35% |
| Arginine ARG (R) | 24 | 5.57% |
| Threonine THR (T) | 17 | 3.94% |
| Tryptophan TRP (W) | 10 | 2.32% |
| Valine VAL (V) | 21 | 4.87% |
| Tyrosine TYR (Y) | 18 | 4.18% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2195 |
| Hydrogen | H | 3338 |
| Nitrogen | N | 604 |
| Oxygen | O | 627 |
| Sulphur | S | 11 |
| Formula | C2195H3338N604O627S11 |
| Total Number of Atoms: | 6775 |
| Total number of positively charged residues (ARG + LYS): | 49 |
| Total number of negatively charged residues (ASP + GLU): | 39 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 81945 Absorption 0.1% (=1 g/l) 1.687, assuming all pairs of CYS residues form cystines Ext. coefficient 81820 Absorption 0.1% (=1 g/l) 1.684, assuming all CYS residues are reduced |
| Aromaticity: | 0.128 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.21 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.09, 26.45, 20.65] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.5011 |
| Grand average of hydropathicity (GRAVY): | -0.39 |