Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5500 |
| Number of amino acids: | 347 |
| Molecular Weight: | 37197.17 Da |
| Theoretical pI: | 6.7 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 9.51% |
| Cysteine CYS (C) | 11 | 3.17% |
| Glutamic Acid GLU (E) | 11 | 3.17% |
| Aspartic Acid ASP (D) | 13 | 3.75% |
| Glycine GLY (G) | 24 | 6.92% |
| Phynylalanine PHE (F) | 19 | 5.48% |
| Isoleucine ILE (I) | 30 | 8.65% |
| Histidine HIS (H) | 7 | 2.02% |
| Lysine LYS (K) | 17 | 4.9% |
| Methionine MET (M) | 15 | 4.32% |
| Leucine LEU (L) | 45 | 12.97% |
| Asparagine ASN (N) | 7 | 2.02% |
| Glutamine GLN (Q) | 8 | 2.31% |
| Proline PRO (P) | 13 | 3.75% |
| Serine SER (S) | 28 | 8.07% |
| Arginine ARG (R) | 6 | 1.73% |
| Threonine THR (T) | 28 | 8.07% |
| Tryptophan TRP (W) | 2 | 0.58% |
| Valine VAL (V) | 24 | 6.92% |
| Tyrosine TYR (Y) | 6 | 1.73% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1688 |
| Hydrogen | H | 2715 |
| Nitrogen | N | 413 |
| Oxygen | O | 473 |
| Sulphur | S | 26 |
| Formula | C1688H2715N413O473S26 |
| Total Number of Atoms: | 5315 |
| Total number of positively charged residues (ARG + LYS): | 23 |
| Total number of negatively charged residues (ASP + GLU): | 24 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 20565 Absorption 0.1% (=1 g/l) 0.553, assuming all pairs of CYS residues form cystines Ext. coefficient 19940 Absorption 0.1% (=1 g/l) 0.536, assuming all CYS residues are reduced |
| Aromaticity: | 0.078 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.19 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [36.31, 20.75, 29.97] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 113.862 |
| Grand average of hydropathicity (GRAVY): | 0.69 |