Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5495 |
| Number of amino acids: | 262 |
| Molecular Weight: | 29619.12 Da |
| Theoretical pI: | 8.95 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 14 | 5.34% |
| Cysteine CYS (C) | 12 | 4.58% |
| Glutamic Acid GLU (E) | 10 | 3.82% |
| Aspartic Acid ASP (D) | 13 | 4.96% |
| Glycine GLY (G) | 15 | 5.73% |
| Phynylalanine PHE (F) | 11 | 4.2% |
| Isoleucine ILE (I) | 16 | 6.11% |
| Histidine HIS (H) | 7 | 2.67% |
| Lysine LYS (K) | 25 | 9.54% |
| Methionine MET (M) | 7 | 2.67% |
| Leucine LEU (L) | 23 | 8.78% |
| Asparagine ASN (N) | 16 | 6.11% |
| Glutamine GLN (Q) | 8 | 3.05% |
| Proline PRO (P) | 8 | 3.05% |
| Serine SER (S) | 27 | 10.31% |
| Arginine ARG (R) | 8 | 3.05% |
| Threonine THR (T) | 10 | 3.82% |
| Tryptophan TRP (W) | 2 | 0.76% |
| Valine VAL (V) | 14 | 5.34% |
| Tyrosine TYR (Y) | 16 | 6.11% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1319 |
| Hydrogen | H | 2059 |
| Nitrogen | N | 351 |
| Oxygen | O | 386 |
| Sulphur | S | 19 |
| Formula | C1319H2059N351O386S19 |
| Total Number of Atoms: | 4134 |
| Total number of positively charged residues (ARG + LYS): | 33 |
| Total number of negatively charged residues (ASP + GLU): | 23 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 35590 Absorption 0.1% (=1 g/l) 1.202, assuming all pairs of CYS residues form cystines Ext. coefficient 34840 Absorption 0.1% (=1 g/l) 1.176, assuming all CYS residues are reduced |
| Aromaticity: | 0.111 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.96 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.30, 25.19, 20.61] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 78.8931 |
| Grand average of hydropathicity (GRAVY): | -0.28 |