Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5489 |
| Number of amino acids: | 330 |
| Molecular Weight: | 36504.84 Da |
| Theoretical pI: | 6.23 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 12 | 3.64% |
| Cysteine CYS (C) | 9 | 2.73% |
| Glutamic Acid GLU (E) | 9 | 2.73% |
| Aspartic Acid ASP (D) | 19 | 5.76% |
| Glycine GLY (G) | 20 | 6.06% |
| Phynylalanine PHE (F) | 21 | 6.36% |
| Isoleucine ILE (I) | 18 | 5.45% |
| Histidine HIS (H) | 5 | 1.52% |
| Lysine LYS (K) | 18 | 5.45% |
| Methionine MET (M) | 2 | 0.61% |
| Leucine LEU (L) | 52 | 15.76% |
| Asparagine ASN (N) | 24 | 7.27% |
| Glutamine GLN (Q) | 14 | 4.24% |
| Proline PRO (P) | 19 | 5.76% |
| Serine SER (S) | 35 | 10.61% |
| Arginine ARG (R) | 8 | 2.42% |
| Threonine THR (T) | 20 | 6.06% |
| Tryptophan TRP (W) | 3 | 0.91% |
| Valine VAL (V) | 14 | 4.24% |
| Tyrosine TYR (Y) | 8 | 2.42% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1650 |
| Hydrogen | H | 2581 |
| Nitrogen | N | 423 |
| Oxygen | O | 488 |
| Sulphur | S | 11 |
| Formula | C1650H2581N423O488S11 |
| Total Number of Atoms: | 5153 |
| Total number of positively charged residues (ARG + LYS): | 26 |
| Total number of negatively charged residues (ASP + GLU): | 28 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 28920 Absorption 0.1% (=1 g/l) 0.792, assuming all pairs of CYS residues form cystines Ext. coefficient 28420 Absorption 0.1% (=1 g/l) 0.779, assuming all CYS residues are reduced |
| Aromaticity: | 0.097 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 29.07 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [35.15, 29.70, 22.73] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 98.6668 |
| Grand average of hydropathicity (GRAVY): | -0.01 |