Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5486 |
| Number of amino acids: | 264 |
| Molecular Weight: | 30331.74 Da |
| Theoretical pI: | 9.15 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 9 | 3.41% |
| Cysteine CYS (C) | 11 | 4.17% |
| Glutamic Acid GLU (E) | 11 | 4.17% |
| Aspartic Acid ASP (D) | 11 | 4.17% |
| Glycine GLY (G) | 19 | 7.2% |
| Phynylalanine PHE (F) | 10 | 3.79% |
| Isoleucine ILE (I) | 10 | 3.79% |
| Histidine HIS (H) | 8 | 3.03% |
| Lysine LYS (K) | 14 | 5.3% |
| Methionine MET (M) | 8 | 3.03% |
| Leucine LEU (L) | 25 | 9.47% |
| Asparagine ASN (N) | 19 | 7.2% |
| Glutamine GLN (Q) | 12 | 4.55% |
| Proline PRO (P) | 7 | 2.65% |
| Serine SER (S) | 20 | 7.58% |
| Arginine ARG (R) | 19 | 7.2% |
| Threonine THR (T) | 12 | 4.55% |
| Tryptophan TRP (W) | 3 | 1.14% |
| Valine VAL (V) | 21 | 7.95% |
| Tyrosine TYR (Y) | 15 | 5.68% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1335 |
| Hydrogen | H | 2087 |
| Nitrogen | N | 385 |
| Oxygen | O | 387 |
| Sulphur | S | 19 |
| Formula | C1335H2087N385O387S19 |
| Total Number of Atoms: | 4213 |
| Total number of positively charged residues (ARG + LYS): | 33 |
| Total number of negatively charged residues (ASP + GLU): | 22 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 39475 Absorption 0.1% (=1 g/l) 1.301, assuming all pairs of CYS residues form cystines Ext. coefficient 38850 Absorption 0.1% (=1 g/l) 1.281, assuming all CYS residues are reduced |
| Aromaticity: | 0.106 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 50.65 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.82, 24.62, 20.08] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 78.1818 |
| Grand average of hydropathicity (GRAVY): | -0.38 |